HCLSIG/LODD/Meetings/2009-07-08 Conference Call

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Conference Details

  • Date of Call: Wednesday July 8, 2009
  • Time of Call: 11:00am Eastern Daylight Time (EDT), 16:00 British Summer Time (BST), 17:00 Central European Time (CET)
  • Dial-In #: +1.617.761.6200 (Cambridge, MA)
  • Dial-In #: + (Nice, France)
  • Dial-In #: +44.117.370.6152 (Bristol, UK)
  • Participant Access Code: 4257 ("HCLS").
  • IRC Channel: irc.w3.org port 6665 channel #HCLS (see W3C IRC page for details, or see Web IRC)
  • Duration: ~1h
  • Convener: Susie


  • Data update (data sets & links) - Anja
  • Progress on STITCH - Matthias, Anja
  • Demo of Linked Data application - Jun
  • DILS Poster - Jun
  • iTriplification Challenge - Anja
  • AOB


Attendees: Bosse, Oktie, Eric, Ted, Pat, Jun, Susie, Anja

<Susie> scribenick: Otkie

<OktieH> Anja: we are re-generatinig all the links

<OktieH> Anja: working with Jun on a new server

<OktieH> Anja: you can subscribe to be notified about changes

<AnjaJentzsch> Notification protocol: http://www4.wiwiss.fu-berlin.de/bizer/silk/wodlmp/

<OktieH> Anja: started a Google doc for the triplification challenge report

<OktieH> Susie: are there more information on linkages?

<junzhao> http://www.open-biomed.org.uk/tcmdata/dilsposter.pdf

<OktieH> Anja: we have some tables in our last paper

<OktieH> Jun: posted link to poster

<OktieH> Susie: need to know how datasets are connected, only counts won't help use cases

<teds> note that some organizations (like pfizer) block Google Documents

<OktieH> Anja: can improve the cloud to write info on the arrows and bubbles

<OktieH> Anja: will send a link to Google spreadsheet that contains the detailed info for linkages

<OktieH> Jun: describing the DILS poster

<OktieH> Jun: would like to know what others think about use cases

<OktieH> Jun: not sure about the second usecase in the poster

  • ** ericP changed the topic to: Linked Data App demo on webex:

<AnjaJentzsch> http://www4.wiwiss.fu-berlin.de/stitch/

<OktieH> Susie: what is in stitch?

<junzhao> http://stitch.embl.de/cgi/show_network_section.pl, search using CID0000001003

<junzhao> susie, would be nice to document the datasets for creating the use cases

<junzhao> http://www4.wiwiss.fu-berlin.de/sider/page/drugs/1003

<ericP> topic: Linked Data App demo

<OktieH> Jun is showing the demo on webex

<OktieH> Jun: feel free to play with the demo, but the server is slow, don't run too many queries

<OktieH> Jun: demo on http://www.open-biomed.org.uk/admed/admedapps/searchTCMByDiseaseName/

<OktieH> Susie: what are the sources of performance challenges?

<OktieH> Jun: it's related to the server

<OktieH> Jun: it's a virtual machine that hosts everything now

<OktieH> Jun: hope we migrate to a new server soon

<OktieH> Susie: we need a reliable server to share use cases with other scientists

<AnjaJentzsch> http://sideeffects.embl.de/

<OktieH> Anja: posted the link where SIDER dataset comes from