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June 20, 2011


6.1.1 June 20, 2011 • Presentation: Anita de Waard, Elsevier Labs. • The Executable Paper Challenge - Slides: http://www.slideshare.net/anitawaard/executable-papershttp://www.w3.org/wiki/HCLSIG/SWANSIOC/Actions/RhetoricalStructure/meetings/20110620

Attendees: Tim Clark, Jodi Schneider, David Shotton, Scott Marshall, Eric Prud’hommeux

10:06	Anita	http://www.slideshare.net/anitawaard/executable-papers
10:07	mscottm For free open source screen sharing software (Michel Dumontier is hosting an instance on his server that we've used a  few times now), checkout Big Blue Button.
10:11	mscottm	http://www.slideshare.net/anitawaard/executable-papers
10:19	jodi	that sounds lovely!
10:20	jodi	http://www.slideshare.net/anitawaard/executable-papers/6
10:20	jodi	Stephen Wan, Cecile Paris, Robert Dale, Michael Muthukrishna, Ilya Anisimoff and Julien Blondeau, Australia, “Citation Sensitive In-Browser Summarisation of Cited Documents”
10:42	Anita	Tim: making things executable puts requirements on the code authors
10:43	Anita	Tim: is this a journal or a platform? Anita: I think thinking of it as a journal is an exciting thought
10:43	Anita	Tim: how do you get academic credit for this?
10:44	Anita	E.g. Open Access in Computer Science: http://www.sciencedirect.com/science/journal/18770509
10:44	Anita	http://www.sciencedirect.com/science/journal/18770509
10:46	Anita	Scott: relieved to hear Carole was a judge - very relevant to the Wf4ever project
10:47	Anita	mscottm: have been thinking a lot if someone makes a programmatic assertion: Publish assertion -> refer to program code e.g. nanopublication on SNPs, where is code? Can we point to it?
10:48	Anita	mscottm: Refer to code as evidence to where results came from; have a file that it runs in, go to registry, give back a URI? provide provenance to code when you query in SPARQL
10:48	Zakim	-??P21
10:49	Tim	this has a number of implications for design of "nanopublications" -
10:58	Anita	DavidShotton: concept of a data journal: wrapper around a data set - more than a pointer to the executable component
10:59	Anita	DavidShotton: would be easier to start with the lightweight model - or go to an existing journal and change that?
10:59	Anita	ericP: I have some code, making a web service; not making any claim about what form the data is in
11:02	davidshotton	SADI?
11:03	Anita	E.g. take SADI and put publication credentials around it - now you can cite it, use it in a workflow, now nicely self-described, I get props
11:03	Anita	http://sadiframework.org/content/
11:05	jodi	https://sites.google.com/site/executablepaper/
11:07	jodi	http://openrepositories.org/
11:07	jodi	http://dataconservancy.org/
11:08	davidshotton	Dryad is requesting input on how to accommodate archiving of software and other non-data content in Dryad: http://blog.datadryad.org/
11:10  jodi http://www.dcc.ac.uk/

Tim Clark is interested in joining. Jodi Schneider also.

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