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Catalog002 looks for standard test cases that have no output file. It shows me that this is the case for namespaceDecl-3 and fn-doc-35. I believe that fn-doc-35 should be changed to a runtime-error. I'm not sure what should be done to namespaceDecl-3 (see Bug #5087).
Should be fixed in CVS. Seems Catalog003 has regressed as well, looking into it.