LODD-TMO consistency checking

Goal

Doing ongoing consistency checking of data generated by the Linked Open Drug Data project together with the ontology created by the Pharma Ontology project and mutual mappings.

Participants

Matthias Samwald
(Add yourself here)

Methods and Results (work in progress)

Using BigOWLIM

The following datasets were loaded into BigOWLIM

drugbank
dailymed
diseaseome
sider
tmo
tmo-external
tmo-mapping (relevant parts of mappings listed in http://esw.w3.org/HCLSIG/PharmaOntology/Data/MappingDataToTMO )
lodd-integration (at the bottom of http://esw.w3.org/HCLSIG/PharmaOntology/Data/MappingDataToTMO )

To test for very basic inconsistencies, the following queries were run:

PREFIX owl:<http://www.w3.org/2002/07/owl#>
PREFIX rdfs:<http://www.w3.org/2000/01/rdf-schema#>
ASK
{
?a owl:disjointWith ?b .
?i a ?a .
?i a ?b .
}

Result on 24.09.2010: No inconsistencies detected

---


PREFIX owl:<http://www.w3.org/2002/07/owl#>
PREFIX rdfs:<http://www.w3.org/2000/01/rdf-schema#>
ASK
{
?a owl:disjointWith ?b .
?c rdfs:subClassOf ?a .
?c rdfs:subClassOf ?b .
}

Result on 24.09.2010: No inconsistencies detected