FDA TAs in OWL

This directory contains an OWL representation of the FDA Therapeutic Area ontologies. Protégé users can import all sample instance data and ontologies from subjects.ttl.

• base ontologies : tests/RenalTransplantation/
  • imported subset of BRIDG : bridg-classes.ttl
  • Minimal shared datatypes : datatypes.ttl
  • Core shared ontology : core.ttl
  • placeholder drug ontology : drugs.ttl
• shared ontologies : tests/RenalTransplantation/
  • blood work: hematapoietic.ttl
  • genito-urinary: renal.ttl
  • muscular-skeletal: skeletal.ttl
  • systemic concepts: systemic.ttl
  • transplant concepts: transplant.ttl
  • quality of life: qualityOfLife.ttl
• Anticoagulants.ttl: Anticoagulants.ttl
• ComplicatedUTI.ttl: ComplicatedUTI.ttl
• Osteoporosis.ttl: Osteoporosis.ttl
• RenalTransplantation.ttl: RenalTransplantation.ttl
• RheumatoidArthritis.ttl: RheumatoidArthritis.ttl
• _allTAs.ttl: _allTAs.ttl
• Renal Transplantation tests : tests/RenalTransplantation/
  • example - successful graft : subject-amy.ttl
  • example - subject death : subject-bob.ttl
  • example - graft rejection : subject-sue.ttl
  • inclusion of all subjects : subjects.ttl
  • Protégé resource list : catalog-v001.xml
  • Shape Expressions schema : subject.shex
  • inference needed for tests : infer.sh
  • test survival duration : survival.rq
  • test instance data not in ont : dataClassesNotInOntology.rq
  • test ont classes not in data : ontologyClassesNotInData.rq
• Snapshot of class hierarchy : FDA-TA-renalRejection-Classes-tab.png
• CMap view of MetaModel : TA-MetaModel-cmap.png
• related presentation

	Name	Last modified	Size	Description
	Parent Directory		-
	Anticoagulants-definitions.xlsx	2014-09-14 10:29	18K
	Anticoagulants.ta	2014-09-22 16:30	5.1K
	Anticoagulants.ttl	2014-09-22 16:30	28K
	ComplicatedUTI.ttl	2014-09-23 09:19	25K
	FDA-TA-renalRejection-Classes-tab.png	2013-12-22 15:02	43K
	HEADER.html	2014-09-19 13:23	5.4K
	Makefile	2014-09-14 10:29	2.5K
	Osteoporosis-definitions.xlsx	2014-09-10 08:33	7.9K
	Osteoporosis.ta	2014-09-10 12:41	722
	Osteoporosis.tapp	2014-09-10 12:41	723
	Osteoporosis.ttl	2014-09-22 16:31	5.4K
	RenalTransplantation-cmap.svg	2014-05-09 17:43	1.8M
	RenalTransplantation.ttl	2014-09-23 09:11	8.5K
	RheumatoidArthritis-definitions.xlsx	2014-09-22 15:31	30K
	RheumatoidArthritis.ta	2014-09-22 15:31	5.6K
	RheumatoidArthritis.tapp	2014-09-15 10:41	5.5K
	RheumatoidArthritis.ttl	2014-09-22 16:31	47K
	TA-MetaModel-cmap.png	2013-12-17 13:59	158K
	_allTAs.ttl	2014-09-22 15:31	1.4K
	bridg-classes.ttl	2014-09-23 08:30	24K
	catalog-v001.xml	2014-09-22 15:31	1.7K
	core.ttl	2014-09-23 09:55	22K
	datatypes.ttl	2014-09-23 08:28	2.5K
	doc/	2014-05-12 10:13	-
	drugs.ttl	2014-07-21 16:12	1.1K
	hematapoietic.ta	2014-09-22 15:31	266
	hematapoietic.ttl	2014-09-20 06:52	797
	qualityOfLife-definitions.xlsx	2014-09-10 10:03	16K
	qualityOfLife.ta	2014-09-10 10:03	2.6K
	qualityOfLife.tapp	2014-09-10 10:03	3.5K
	qualityOfLife.ttl	2014-09-22 16:31	46K
	renal.ttl	2014-09-23 09:11	14K
	skeletal-definitions.xlsx	2014-09-10 08:33	7.9K
	skeletal.ta	2014-07-21 01:27	767
	skeletal.tapp	2014-07-21 01:27	769
	skeletal.ttl	2014-09-22 16:31	4.3K
	subject.shex	2017-01-22 12:28	3.0K
	systemic.ttl	2014-09-23 09:11	19K
	tests/	2014-02-17 09:35	-
	transplant.ttl	2014-09-23 09:11	11K