W3C

- DRAFT -

SV_MEETING_TITLE

10 Jun 2010

See also: IRC log

Attendees

Present
mscottm, +0122383aaaa, +1.832.386.aabb, Kei_Cheung, +1.206.605.aacc, EricP
Regrets
Chair
SV_MEETING_CHAIR
Scribe
mscottm

Contents


http://esw.w3.org/HCLSIG_BioRDF_Subgroup/MicroarrayExperimentContext

misha: modeling relations between samples and their attributes, assays and their attributes, samples and experiments, samples and assays, genes and conditions,

possibilities: GEO to ArrayExpress (MAGETAB), gene list generation, Gene Atlas RDF, James Malone, Dietrich Rebholz

<scribe> ACTION: Load current microarray study RDF into a triple store [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action01]

<trackbot> Sorry... I don't know anything about this channel

<scribe> ACTION: Lena - look at REST output of Gene Atlas services (gene list output) [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action02]

<trackbot> Sorry... I don't know anything about this channel

<scribe> ACTION: Satya look at EFO type of provenance, maybe discuss with James Malone [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action03]

<trackbot> Sorry... I don't know anything about this channel

https://www.dropbox.com/home/#/bioRDF%40HCLS/

ex: gene1 :probe_set_id "225871_at" ;

:name "six transmembrane epithelial antigen of prostate 2" ;

rdfs: label "STEAP2" ;

rdf: type :gene ;

:expressed_in ex:sample1 .

<LenaDeus> public link: https://docs.google.com/leaf?id=0B1yJy66aJ50tNDAxZDQ1M2YtNGM2ZC00ZjRiLTk3NzUtMTA0ZmMxYjY4NzUx&hl=en

<scribe> ACTION: Scott to talk with Misha Kapushesky, James Malone at EBI next week [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action04]

<trackbot> Sorry... I don't know anything about this channel

bye!

Summary of Action Items

[NEW] ACTION: Lena - look at REST output of Gene Atlas services (gene list output) [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action02]
[NEW] ACTION: Load current microarray study RDF into a triple store [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action01]
[NEW] ACTION: Satya look at EFO type of provenance, maybe discuss with James Malone [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action03]
[NEW] ACTION: Scott to talk with Misha Kapushesky, James Malone at EBI next week [recorded in http://www.w3.org/2010/06/10-hcls-minutes.html#action04]
 
[End of minutes]

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$Date: 2010/06/10 16:10:32 $

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People with action items: lena load satya scott

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