16:02:43 <RRSAgent> RRSAgent has joined #hcls2
16:02:43 <RRSAgent> logging to http://www.w3.org/2011/05/26-hcls2-irc
16:02:58 <michel> rrsagent, make logs public
16:03:04 <michel> zakim, this is tmo
16:03:08 <Zakim> ok, michel; that matches SW_HCLS(TMO)11:00AM
16:03:13 <Zakim> +??P14
16:03:27 <michel> zakim, ??P14 is michel
16:03:27 <Zakim> +michel; got it
16:03:39 <iker> iker has joined #hcls2
16:03:58 <Zakim> +drubin
16:04:06 <Zakim> -drubin
16:04:15 <Zakim> + +46.4.63.3.aacc
16:04:23 <Zakim> +Bob_Powers
16:04:47 <Zakim> +drubin
16:05:01 <Fred> this is fred
16:05:30 <Bob> Bob has joined #hcls2
16:05:42 <Zakim> +mscottm
16:05:43 <Bob> Fred, Hello!
16:05:49 <Bin> Bin has joined #hcls2
16:06:00 <Fred> Hi Bob
16:07:05 <mscottm> mscottm has joined #hcls2
16:07:23 <Zakim> - +46.4.63.3.aacc
16:07:45 <Zakim> + +1.518.276.aadd
16:07:51 <michel> topic: http://www.w3.org/wiki/HCLSIG/PharmaOntology/Meetings/2011-05-26_Conference_Call
16:08:00 <Bob> scribenick Bob
16:08:04 <michel> Topic: http://www.w3.org/wiki/HCLSIG/PharmaOntology/Meetings/2011-05-26_Conference_Call
16:09:28 <TrishWhetzel> TrishWhetzel has joined #hcls2
16:09:40 <Bob> Michel: Iker's work, where are you going with this?
16:10:07 <Adrien> Adrien has joined #HCLS2
16:10:17 <Zakim> + +46.4.63.3.aaee
16:10:26 <michel> welcome adrien
16:10:34 <Zakim> +EricP
16:10:38 <Adrien> hello Michel
16:10:47 <michel> zakim, +46.4.63.3.aaee is Adrien
16:10:47 <Zakim> +Adrien; got it
16:10:48 <Zakim> -Adrien
16:10:56 <Bob> Iker: Next step is to try to develop bc use case front end for third parties
16:11:51 <mikel_egana> mikel_egana has joined #hcls2
16:12:29 <Zakim> +Adrien
16:12:59 <Bob> Michel: Have been talking re bc, till after warfarin use case
16:13:11 <Zakim> -Adrien
16:13:48 <Bob> Michel: Changes to document, good.
16:14:04 <Bob> ... Matthias took the main task of paper structure
16:14:05 <michel> https://docs.google.com/document/d/1lKdDSb2uBBIeTEQAv2CyTHN_aVW63k9si1hmmilOMi0/edit?hl=en_US&authkey=CJGUtcwF#
16:14:26 <Bob> ... Thanks Matthias!
16:14:43 <JLuciano> JLuciano has joined #hcls2
16:14:51 <JLuciano> Ahh, finally in!
16:15:35 <ericP> ericP has changed the topic to: http://www.w3.org/wiki/HCLSIG/PharmaOntology/Meetings/2011-05-26_Conference_Call
16:15:47 <Zakim> +Adrien
16:16:53 <mscottm> tx ericP
16:17:46 <Zakim> +??P21
16:23:24 <Bob> Bob: use cases...
16:23:59 <Zakim> -Adrien
16:24:09 <Bob> Michel: Warfarin predictive pgx
16:24:38 <Zakim> +Adrien
16:24:42 <Bob> ... id'ed some basic papers, warfarin intial dose; Elgar knows this.
16:24:58 <Bob> Joanne: Got a dataset converted.
16:26:03 <Bob> Adrien: Text mining
16:27:31 <Adrien> https://docs.google.com/leaf?id=0B9srYIaZdLc8NDdkNzFhNGUtZDU0ZS00MjVjLWI4ZDktYTAzN2JhMWY4ZGE3&hl=en_US
16:28:33 <matthias_samwald> matthias_samwald has joined #hcls2
16:28:46 <Adrien> https://spreadsheets.google.com/spreadsheet/ccc?key=0AtsrYIaZdLc8dE5JUHl0cVBlOFZCaWV4a2NlbnlyNVE&hl=en_US
16:28:50 <matthias_samwald> I will join the telecon in a minute
16:33:23 <Zakim> + +1.302.598.aaff
16:33:28 <Zakim> -drubin
16:33:36 <JLuciano> where are we looking now? I had to deal with an interruption
16:34:48 <Bob> What color is he?
16:34:50 <Zakim> -Adrien
16:35:44 <Zakim> +Adrien
16:37:38 <Zakim> + +43.699.811.6aagg
16:38:11 <ericP> Zakim, aagg is matthias_samwald 
16:38:11 <Zakim> +matthias_samwald; got it
16:38:13 <Zakim> -Adrien
16:46:36 <Adrien> https://docs.google.com/leaf?id=0B9srYIaZdLc8NDdkNzFhNGUtZDU0ZS00MjVjLWI4ZDktYTAzN2JhMWY4ZGE3&hl=en_US
16:46:36 <Bob> :-)
16:48:15 <Bob> Michel: Ontology itself. Matthias has been looking at allele etc onts.
16:50:40 <Bob> Michel: We have an instance of web-Protege
16:51:10 <Bob> Adrien: Seq Ontology is much more used than mine.
16:51:46 <Bob> ... SNP can be described at DNA, protein-level, etc
16:52:23 <JLuciano> I need to leave call now.   regrets. Joanne
16:52:30 <Zakim> - +1.518.276.aadd
16:52:38 <JLuciano> that was me
16:53:24 <Bob> Matthias: Let's not import too much complexity into our ontology.
16:54:16 <Bob> ... course of action should be to avoid OWL import of entire Seq Ont
16:54:34 <Bob> ... import a subset of Seq Ont, or create our own ont
16:54:43 <Bob> ... prefer our own ontology
16:54:56 <Bob> http://www.hgvs.org/mutnomen/recs.html
16:55:03 <Bob> +q
16:55:33 <Bob> Michel: Manchester has tech to import sub-ontology stuff
16:56:15 <mscottm> it's also hard for me to hear..
16:56:17 <Zakim> -EricP
16:56:25 <mscottm> much better!
16:56:47 <Bob> Trish: One other option is BioPortal reference plug-in
16:57:22 <mscottm> sounds tantalizing
16:57:38 <Bob> ... for Protege, should be some version for web-Protege
16:59:01 <michel> bob's link is very good
16:59:48 <Zakim> - +1.302.598.aaff
17:01:10 <Bob> Iker and Chris will get web-Protege up and running
17:02:27 <Bob> Matthias: Let's consolidate emails, etc
17:02:35 <Bob> Scott: +1
17:02:57 <Bob> Michel: Google group? Scott - yes
17:04:36 <Bob> MIAME?
17:04:51 <Zakim> - +1.714.616.aabb
17:04:52 <Zakim> -michel
17:04:52 <Zakim> -Bob_Powers
17:04:55 <Adrien> bye
17:04:56 <Zakim> -??P3
17:04:57 <Zakim> -mscottm
17:04:58 <Zakim> -matthias_samwald
17:05:01 <Zakim> -??P21
17:05:02 <Zakim> SW_HCLS(TMO)11:00AM has ended
17:05:04 <Zakim> Attendees were +46.4.63.3.aaaa, +1.714.616.aabb, michel, drubin, +46.4.63.3.aacc, Bob_Powers, mscottm, +1.518.276.aadd, EricP, Adrien, +1.302.598.aaff, +43.699.811.6aagg,
17:05:06 <Zakim> ... matthias_samwald
17:05:10 <michel> rrsagent, draft minutes
17:05:10 <RRSAgent> I have made the request to generate http://www.w3.org/2011/05/26-hcls2-minutes.html michel
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17:29:17 <paoloC> ericP you around?
17:33:38 <ericP> paolo never lingers long
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