14:52:44 <RRSAgent> RRSAgent has joined #BioRDF
14:52:44 <RRSAgent> logging to http://www.w3.org/2008/10/06-BioRDF-irc
14:52:59 <kei> Zakim, this will be BioRDF
14:53:00 <Zakim> ok, kei; I see SW_HCLS()11:00AM scheduled to start in 8 minutes
14:53:23 <kei> agenda+ roll call and introduction [Kei]
14:53:41 <kei> agenda+ NIF talk [Maryann Martone]
14:54:57 <kei> agenda+ BioGateway talk [Erick Antezana]
14:55:08 <kei> agenda+ Q&A [All]
14:55:21 <kei> Eric, it's great to have you join!
14:56:20 <kei> Zakim, take up next agendum
14:56:20 <Zakim> agendum 1. "roll call and introduction" taken up [from Kei]
14:59:45 <Zakim> SW_HCLS()11:00AM has now started
14:59:47 <Zakim> +Kei_Cheung
15:00:44 <Zakim> +??P3
15:00:46 <Zakim> -??P3
15:00:46 <Zakim> +??P3
15:01:17 <Zakim> + +1.203.404.aaaa
15:01:19 <Susie> Susie has joined #BioRDF
15:01:36 <Zakim> + +1.312.041.aabb
15:01:37 <Zakim> +??P13
15:02:03 <Zakim> + +1.781.662.aacc
15:02:53 <ericP> Zakim, pelase dial ericP-office
15:02:53 <Zakim> I don't understand 'pelase dial ericP-office', ericP
15:02:59 <ericP> Zakim, please dial ericP-office
15:02:59 <Zakim> ok, ericP; the call is being made
15:03:01 <Zakim> +EricP.a
15:03:15 <Susie> zakim, +1.781.662.aacc is Susie
15:03:24 <mscottm> mscottm has joined #biordf
15:03:25 <Zakim> +Susie; got it
15:03:29 <ericP> Zakim, pelase disconnect ericP-office
15:03:33 <Zakim> -EricP.a
15:03:34 <ericP> Zakim, please disconnect ericP-office
15:03:40 <Zakim> + +329385aadd
15:03:41 <ericP> Zakim,  who is here?
15:03:44 <Zakim> I don't understand 'pelase disconnect ericP-office', ericP
15:03:49 <Zakim> sorry, ericP, I do not see a party named 'ericP-office'
15:03:56 <Zakim> On the phone I see Kei_Cheung, ??P3, +1.203.404.aaaa, +1.312.041.aabb, ??P13, Susie, +329385aadd
15:04:03 <ericP> Zakim, please dial ericP-office
15:04:04 <Zakim> +Karen_Skinner
15:04:08 <Zakim> On IRC I see mscottm, Susie, RRSAgent, Zakim, kei, ericP
15:04:13 <Zakim> ok, ericP; the call is being made
15:04:16 <Zakim> +EricP
15:05:09 <marco> marco has joined #BioRDF
15:07:10 <kei> scottm, rob frost, maryann, susie, luis, ericP, erick, karen skinner
15:10:49 <ericP> ericP has changed the topic to: BioRDF Task Force meeting: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2008-10-6http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2008-10-6
15:11:00 <ericP> ericP has changed the topic to: BioRDF Task Force meeting: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2008-10-6
15:11:10 <Susie> Introductions
15:11:33 <ericP> Topic: Introductions
15:11:55 <ericP> Susie: Eli Lilly. started with SemWeb when at Oracle
15:12:09 <ericP> ... chaired BioRDF TF, now cochair HCLS IG
15:12:20 <Susie> Kei: Yale, focused on data integration
15:12:32 <ericP> mscottm: semantic e-Science: combinging SW with information retrieval
15:12:48 <Zakim> -??P3
15:12:59 <ericP> ... co-chair hcls and steady contributed to BioRDF
15:13:33 <Zakim> + +2
15:13:47 <Susie> EricP, W3C, focus on Semantic Web since the beginning, staff contact for the HCLS group, working on project for Lilly 
15:14:09 <Susie> Marco, works with Scott, doing bioinformatics work with Semantic Web
15:14:27 <ericP> Bob Brost: co-founder of Vector-C
15:14:32 <Zakim> + +1.858.200.aaff
15:14:48 <ericP> ... former tech lead for semantic apps at BEA
15:15:00 <Susie> Rob, co-founder of semantic web consulting company, was at BEA, specific interest in HCLS due to past experience in medical informatics
15:15:15 <ericP> ... have specific intrest in medical informatics. have experience with UMLS concept extraction
15:15:30 <ericP> Zakim, +1.858.200.aaff is marryAnn
15:15:30 <Zakim> +marryAnn; got it
15:16:16 <ericP> KarenSkinner: program officer at NIH in drug rehab area
15:16:31 <ericP> ... project officer for the NIST contract
15:16:31 <Susie> Karen, work at NIH, National Institute of Drug Abuse, focus on encouraging applications, networks, biomedical computing, basic research, contact for NIF
15:17:12 <ericP> MaryAnn: neurocientist, got intrestes in informations in late 90s in order to access large imaging data stores
15:17:20 <Susie> MaryAnn, UCSD, neuroscientist by training, interested in informatics in late '90s, particularly relating to large imaging data sets
15:18:01 <ericP> ... working on mediators for database integration
15:18:15 <ericP> ... also working as PI NIST project
15:18:46 <ericP> KarenSkinner: NIST project is part of collection of NIH and 15 institutes
15:19:06 <ericP> ... different institutes take leads. mine promoted better resource inventory
15:19:52 <ericP> Eric Antezana
15:20:02 <kei> Erick instead of Eric
15:21:39 <kei> marenco: MD,traildb, senselab, NIF, ontology relation db's, database integration, eav/cr
15:22:33 <ericP-mibbit> ericP-mibbit has joined #BioRDF
15:23:03 <Susie> MaryAnn presents on Neuroscience Information Framework 
15:23:23 <ericP> topic: MaryAnn presents on Neuroscience Information Framework
15:23:41 <Susie> EricP, I'll leave you to scribe...
15:23:57 <ericP> scribenick: ericP
15:24:30 <kei> Zakim, take up next agendum
15:24:30 <Zakim> agendum 2. "NIF talk" taken up [from Maryann Martone]
15:29:48 <kei> kei: registry of resources
15:30:17 <kei> maryann: 5 sources registered for pilot demonstration
15:31:01 <kei> maryann: framework -- be able to serve people/institutions with different needs/resources
15:37:19 <kei> maryann: NIF ontologies were designed based on OBO Foundry priciples
15:37:49 <kei> maryann: neuron definition/information needs to be expanded
15:38:11 <kei> maryann: gene products are another area of possible expansion
15:45:26 <ericP> Topic: BioGateway presentation [Erick Antezana]
15:47:01 <kei> Zakim, take up next agendum
15:47:01 <Zakim> agendum 3. "BioGateway talk" taken up [from Erick Antezana]
15:47:39 <kei> Erick: biogateway -- systems biology approach to knowledge integration/discovery
15:48:16 <kei> Erick: the system will help people to come up with hypotheses (with support of reasoning/query provided by OWL/RDF)
15:50:00 <kei> Erick: use cases or examples are demonstrated
15:50:40 <kei> Erick: goal is to answer these scientific questions
15:55:25 <ericP> q+ to ask if GO identifiers line up with HCLS KB
15:55:35 <kei> Erick: UniProt, NCBI ontologies, Meta ontologies from OBO ...
16:01:15 <kei> Zakim, take up next agendum
16:01:15 <Zakim> I see a speaker queue remaining and respectfully decline to close this agendum, kei
16:02:13 <Zakim> -Susie
16:02:28 <ericP> Zakim, ack me
16:02:28 <Zakim> ericP, you wanted to ask if GO identifiers line up with HCLS KB
16:02:29 <Zakim> I see no one on the speaker queue
16:04:33 <mscottm> q+
16:05:14 <kei> kei: URI globalization?
16:05:35 <kei> scott: not using owl?
16:06:03 <ericP> mscottm: very impressed with Karen and Erick's systems
16:06:28 <ericP> ... Erick, does using OWL really keep you from being efficient
16:06:38 <kei> erick: going from rdf to owl is a big step
16:06:56 <ericP> q+ to note graph isomorphisn between A-box OWL and simpler RDF assertions
16:07:01 <ericP> ack mscottm 
16:08:02 <ericP> ack me
16:08:02 <Zakim> ericP, you wanted to note graph isomorphisn between A-box OWL and simpler RDF assertions
16:12:45 <Zakim> -Karen_Skinner
16:12:45 <Zakim> -marryAnn
16:12:46 <Zakim> - +2
16:12:48 <Zakim> -??P13
16:12:51 <Zakim> -EricP
16:12:54 <Zakim> - +1.203.404.aaaa
16:12:56 <Zakim> - +329385aadd
16:13:00 <Zakim> -Kei_Cheung
16:13:45 <Zakim> - +1.312.041.aabb
16:13:46 <Zakim> SW_HCLS()11:00AM has ended
16:13:48 <Zakim> Attendees were Kei_Cheung, +1.203.404.aaaa, +1.312.041.aabb, EricP.a, Susie, +329385aadd, Karen_Skinner, EricP, +2, marryAnn
16:14:43 <kei> RRSAgent, please draft minutes
16:14:43 <RRSAgent> I have made the request to generate http://www.w3.org/2008/10/06-BioRDF-minutes.html kei
16:15:00 <kei> RRSAgent, please make log world-visible