14:59:43 RRSAgent has joined #hcls 14:59:43 logging to http://www.w3.org/2012/06/25-hcls-irc 15:00:14 egombocz has joined #hcls 15:02:03 boycer has joined #hcls 15:03:15 michael has joined #hcls 15:03:34 hi, it's mikel, not mathias :-) 15:08:04 Mikel (introduction): Biologist by training, got PhD at UManchester, now a post doc at Mark Wilkinson's lab. 15:08:12 http://www.bioontology.org/wiki/index.php/BioPortal_REST_services 15:08:42 Scott: asks Richard about scripts for his linked data project (clinical reports and drugs) 15:08:46 http://www.bioontology.org/wiki/index.php/Annotator_Client_Examples 15:09:37 http://www.w3.org/2001/sw/hcls/notes/hcls-rdf-guide/ 15:09:55 example of hitting Bioportal SPARQL endpoint: http://swat-4-med-safety.googlecode.com/svn/trunk/linkedSPLs/UNII-to-ChEBI-mapping/sparql1-for-drug-entities.py 15:15:18 Richard: Everything from Fig. 2 onward is scrap text. 15:18:44 Scott: Would be nice to have a common SIOC representation of shares, tweets, mailing list postings, etc. for rebroadcast. 15:20:51 Richard: Missing a link to the HCLS Tools wiki page in the document itself. 15:21:37 http://www.w3.org/wiki/HCLSIG/Tools 15:24:45 Action: Scott to ask Eric to remove extra text after Fig. 2 and replace Tools section with http://www.w3.org/wiki/HCLSIG/Tools 15:26:33 The set of tools available for mapping relational data to RDF is rapidly expanding; please see the W3C HCLS Wiki for an expanded list (http://www.w3.org/wiki/index.php?title=HCLSIG/LODD/RelationalDataToRDFTools). 15:27:18 under Q3: The set of tools available for this task is rapidly expanding, please see the W3C HCLS Wiki for an expanded list (http://www.w3.org/wiki/index.php?title=HCLSIG/LODD/NonRelationalDataToRDFTools) 15:33:40 http://gho.aksw.org/ 15:34:45 http://aksw.org/Projects/ReDDObservatory 15:57:43 Scott: Asks for tips for finding/building a radiotherapy oncology ontology 15:58:17 Richard: Remembers NCBO Webinar that talks about tools for extracting targetted slices of FMA and SNOMED. 16:00:01 The Sentient Knowledge Explorer can be downloaded here: http://www.io-informatics.com/download_KE_PersEd_B.html 16:00:29 http://www.io-informatics.com/products/sentient-KE.html 16:01:36 Erich: We are working on a plugin for Knowledge Explorer that allows you to partially import an ontology. 16:03:41 bye! 16:03:49 bye! 16:04:00 michael has left #hcls 16:05:47 Daniel Rubin's Webinar at NCBO http://www.bioontology.org/computer-reasoning-with-quantitative-and-semantic-information-in-radiology-images 16:06:56 RRSAgent, please draft minutes 16:06:56 I have made the request to generate http://www.w3.org/2012/06/25-hcls-minutes.html mscottm 16:07:05 RRSAgent, please make log world visible 16:14:44 anita has joined #hcls 16:15:05 bbb has joined #hcls 17:22:14 Zakim has left #hcls 17:24:20 egonw__ has joined #HCLS