IRC log of HCLS on 2012-03-05
Timestamps are in UTC.
- 16:01:09 [RRSAgent]
- RRSAgent has joined #HCLS
- 16:01:09 [RRSAgent]
- logging to http://www.w3.org/2012/03/05-HCLS-irc
- 16:01:20 [mscottm2]
- Zakim, this is biordf
- 16:01:20 [Zakim]
- ok, mscottm2; that matches SW_HCLS(BioRDF)11:00AM
- 16:01:28 [mscottm2]
- Zakim, who is here?
- 16:01:28 [Zakim]
- On the phone I see Scott_Marshall
- 16:01:29 [Zakim]
- On IRC I see RRSAgent, mscottm2, achille_z, matthias_samwald1, MacTed, egonw_, Zakim, ericP
- 16:02:33 [mikel_egana]
- mikel_egana has joined #hcls
- 16:03:02 [Zakim]
- +ericP
- 16:03:21 [Zakim]
- + +1.206.732.aaaa
- 16:03:25 [matthias_samwald]
- matthias_samwald has joined #hcls
- 16:03:38 [Zakim]
- + +34.65.672.aabb
- 16:03:42 [michael]
- michael has joined #hcls
- 16:03:42 [Zakim]
- +??P14
- 16:03:50 [matthias_samwald]
- zakim, ??P14 is matthias_samwald
- 16:03:50 [Zakim]
- +matthias_samwald; got it
- 16:04:15 [michel]
- michel has joined #hcls
- 16:04:32 [egonw_]
- I will join in 5 minutes
- 16:05:00 [Zakim]
- +[IPcaller]
- 16:05:13 [michel]
- zakim, IPcaller is michel
- 16:05:13 [Zakim]
- +michel; got it
- 16:06:23 [Zakim]
- -matthias_samwald
- 16:06:53 [Zakim]
- +??P14
- 16:07:04 [matthias_samwald]
- zakim, ??P14 is matthias_samwald
- 16:07:04 [Zakim]
- +matthias_samwald; got it
- 16:07:12 [Zakim]
- +[IPcaller]
- 16:07:31 [egonw_]
- zakim, IPcaller is egonw
- 16:07:31 [Zakim]
- +egonw; got it
- 16:09:29 [boycer]
- boycer has joined #hcls
- 16:10:23 [Zakim]
- + +1.412.802.aacc
- 16:14:14 [Zakim]
- -matthias_samwald
- 16:14:41 [Zakim]
- +[IPcaller]
- 16:15:38 [egonw_]
- oh, that's interesting!
- 16:15:42 [egonw_]
- yes, please!
- 16:16:29 [ericP]
- -> http://www.w3.org/2006/tools/wiki/Zakim-SIP Zakim-
- 16:19:23 [egonw]
- http://chem-bla-ics.blogspot.com/2012/03/chembl-13-as-rdf.html
- 16:19:56 [Zakim]
- -[IPcaller]
- 16:21:59 [matthias_samwald]
- matthias_samwald has joined #hcls
- 16:22:27 [mscottm2]
- ACTION: Scott addresses Michel's comments
- 16:22:47 [mscottm2]
- ACTION: Egon updates Chembl section
- 16:23:56 [egonw]
- :)
- 16:24:14 [Zakim]
- +[IPcaller]
- 16:24:31 [mscottm2]
- ACTION: Scott requests comments from LOD mailing list
- 16:24:38 [Zakim]
- -[IPcaller]
- 16:25:11 [mscottm2]
- ACTION: Eric and ? moves Google doc to HTML
- 16:26:31 [mikel_egana]
- http://lists.w3.org/Archives/Public/public-lod/2012Feb/0125.html
- 16:26:32 [Zakim]
- +??P3
- 16:27:17 [Zakim]
- -??P3
- 16:29:01 [mscottm2]
- re:LODD google doc https://docs.google.com/document/d/1XzdsjCfPylcyOoNtDfAgz15HwRdCD-0e0ixh21_U0y0/edit
- 16:29:02 [matthias_samwald]
- matthias_samwald has joined #hcls
- 16:33:55 [matthias_samwald]
- matthias_samwald has joined #hcls
- 16:37:25 [mscottm2]
- http://www.iscb.org/cshals2011
- 16:37:41 [Zakim]
- - +34.65.672.aabb
- 16:38:08 [mscottm2]
- http://www.iscb.org/cshals2011-program/cshals2011-tutorial#rpi
- 16:38:15 [egonw]
- http://sparql.tw.rpi.edu/?page_id=57
- 16:39:13 [egonw]
- BTW, my R package is called rrdf and found on CRAN
- 16:43:08 [mscottm2]
- https://docs.google.com/document/d/1A5-3tOsifPWPpETBKU-ZA9d7O7wK_nBzTFUBEe-0Bzo/edit?authkey=CK-y8Y8C&authkey=CK-y8Y8C
- 16:46:44 [egonw]
- so, pointer: http://wikipathways.org
- 16:46:58 [egonw]
- OK
- 16:47:17 [egonw]
- no, I'll have to see how I can contribute larger stuff I am already doing
- 16:47:34 [egonw]
- I will also read the BioRDF note for the context
- 16:55:50 [egonw]
- sorry, I have to go now
- 16:55:55 [egonw]
- noted my action point...
- 16:56:01 [egonw]
- next call is next week, or when?
- 16:56:08 [egonw]
- I am not familiar with the new structure yet
- 16:56:15 [egonw]
- what's the new telcon frequency?
- 16:57:50 [Zakim]
- -egonw
- 16:57:56 [egonw]
- ttl
- 16:58:42 [mscottm2]
- Michel's start on the diagram
- 16:58:51 [mscottm2]
- is here: https://docs.google.com/drawings/d/1ZFA72YBEcc6BQp31GsAJI1L6WK0mPuNltIkpp8WMcSk/edit
- 17:09:46 [Zakim]
- - +1.412.802.aacc
- 17:15:39 [Zakim]
- - +1.206.732.aaaa
- 17:15:41 [Zakim]
- -ericP
- 17:15:42 [Zakim]
- -Scott_Marshall
- 17:15:43 [Zakim]
- -michel
- 17:15:44 [Zakim]
- SW_HCLS(BioRDF)11:00AM has ended
- 17:15:44 [Zakim]
- Attendees were Scott_Marshall, ericP, +1.206.732.aaaa, +34.65.672.aabb, matthias_samwald, michel, egonw, +1.412.802.aacc, [IPcaller]
- 17:17:08 [mscottm2]
- Things left for BioRDF note: Create overview diagram with generic labels
- 17:17:34 [mscottm2]
- ..Michel has started the overview diagram (see above)
- 17:18:32 [mscottm2]
- Create list of corresponding (to overview diagram) predicates and suggested ranges as the target RDF representation
- 17:19:25 [mscottm2]
- ACTION: Modify Jim McCusker's R script to produce target representation from affy diff exp gene list
- 17:20:23 [mscottm2]
- Idea: Provide example SPARQL query that duplicates some aspect of GXA (select data for mouse, liver, Huntington's)
- 17:21:10 [mscottm2]
- ACTION: Scott - ask Lena if she can reproduce diagram with labels instead of identifiers for predicates (on edges)
- 17:22:02 [mscottm2]
- ACTION: Scott - ask Jason Eshelman to look at Google Doc again after above edits are done
- 17:23:02 [mscottm2]
- ACTION: Scott - improve introduction
- 17:48:36 [mscottm2]
- Will followup discussion of frequency / calendar of calls in e-mail. One approach has already been suggested: alternating weeks betw BioRDF / LODD. Another approach: combine the task forces into 1 bi-weekly call (split into ~half hours?).
- 17:48:45 [mscottm2]
- RRSAgent, please draft minutes
- 17:48:45 [RRSAgent]
- I have made the request to generate http://www.w3.org/2012/03/05-HCLS-minutes.html mscottm2
- 17:48:49 [mscottm2]
- RRSAgent, please make log world-visible
- 18:49:26 [matthias_samwald]
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- 19:00:22 [matthias_samwald]
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- 19:22:18 [egonw]
- egonw has joined #HCLS
- 19:31:40 [matthias_samwald]
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- 21:29:24 [egonw]
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- 22:40:37 [db]
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