#Processed by Id: cwm.py,v 1.27 2001/02/05 19:58:24 timbl Exp 
        #    using base file:/devel/WWW/2000/10/swap/test/pathway/
        
#  Notation3 generation by
#       notation3.py,v 1.53 2001/02/05 01:13:24 timbl Exp

#   Base was: file:/devel/WWW/2000/10/swap/test/pathway/
     @prefix log: <http://www.w3.org/2000/10/swap/log#> .
     @prefix : <http://www.daml.org/2001/03/daml+oil#> .
     @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
     @prefix b: <http://www.w3.org/2000/01/rdf-schema#> .
    
    <ACCESSION>     a <c:record> .
    
    <AUTHORS>     a <c:sub_record> .
    
    <BASE_COUNT>     a <c:record> .
    
    <CAAT_region>     a <c:feature_type> .
    
    <CDS>     a <c:feature_type> .
    
    <C_region>     a <c:feature_type> .
    
    <DEFINITION>     a <c:record> .
    
    <D_loop>     a <c:feature_type> .
    
    <D_segment>     a <c:feature_type> .
    
    <FEATURES>     a <c:record> .
    
    <GC_signal>     a <c:feature_type> .
    
    <JOURNAL>     a <c:sub_record> .
    
    <J_region>     a <c:feature_type> .
    
    <KEYWORDS>     a <c:record> .
    
    <LOCUS>     a <c:record> .
    
    <LTR>     a <c:feature_type> .
    
    <N_region>     a <c:feature_type> .
    
    <ORGANISM>     a <c:sub_record> .
    
    <ORIGIN>     a <c:record> .
    
    <RBS>     a <c:feature_type> .
    
    <REFERENCE>     a <c:record> .
    
    <SEGMENT>     a <c:record> .
    
    <SEQUENCE>     a <c:record> .
    
    <SOURCE>     a <c:record> .
    
    <STS>     a <c:feature_type> .
    
    <S_region>     a <c:feature_type> .
    
    <TATA_signal>     a <c:feature_type> .
    
    <TITLE>     a <c:sub_record> .
    
    <VERSION>     a <c:record> .
    
    <V_region>     a <c:feature_type> .
    
    <_10_signal>     a <c:feature_type> .
    
    <_35_signal>     a <c:feature_type> .
    
    <_EC_number>     a :Thing .
      [      a :Disjoint;
             :first <metal>;
             :rest  [
                 a :Disjoint;
                 :rest  (
                 );
                 :first <non_metal> ] ].
    
      [      a :Disjoint;
             :first <chromosome>;
             :rest  [
                 a :Disjoint;
                 :rest  (
                 );
                 :first <plasmid> ] ].
    
      [      a :Disjoint;
             :first <dna>;
             :rest  [
                 a :Disjoint;
                 :rest  (
                 );
                 :first <rna> ] ].
    
      [      a :Disjoint;
             :first <small_molecule>;
             :rest  [
                 a :Disjoint;
                 :rest  (
                 );
                 :first <macromolecule> ] ].
    
      [      a :Disjoint;
             :first  [
                 a b:Class;
                 :oneOf  (
                
                <compartment_A>  ) ];
             :rest  [
                 a :Disjoint;
                 :first  [
                     a b:Class;
                     :oneOf  (
                    
                    <compartment_B>  ) ];
                 :rest  (
                 ) ] ].
    
    <_anticodon>     a :Thing .
    
    <_bound_moiety>     a :Thing .
    
    <_citation>     a :Thing .
    
    <_codon>     a :Thing .
    
    <_codon_start>     a :Thing .
    
    <_cons_splice>     a :Thing .
    
    <_db_xref>     a :Thing .
    
    <_direction>     a :Thing .
    
    <_frequency>     a :Thing .
    
    <_function>     a :Thing .
    
    <_gene>     a :Thing .
    
    <_label>     a :Thing .
    
    <_map>     a :Thing .
    
    <_mod_base>     a :Thing .
    
    <accession_number>     a b:Class;
         b:subClassOf <label> .
    
    <across>     a rdf:Property .
    
    <actin_binding>     a b:Class;
         b:subClassOf <binding> .
    
    <affected_by>     a rdf:Property .
    
    <age>     a b:Class;
         b:subClassOf <condition> .
    
    <allele>     a <c:feature_type> .
    
    <amino_acid>     a b:Class;
         b:subClassOf <small_molecule> .
    
    <anatomy>     a b:Class;
         b:subClassOf <physical_structure> .
    
    <anticoagulant>     a b:Class;
         b:subClassOf <biological_function> .
    
    <apoptosis_inhibitor>     a b:Class;
         b:subClassOf <regulation> .
    
    <around>     a rdf:Property .
    
    <atom>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :toClass  [
                 a b:Class ];
             :onProperty <has_name> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class ];
             :onProperty <has_name> ],
                <chemical> .
    
    <attenuator>     a <c:feature_type> .
    
    <binding>     a b:Class;
         b:subClassOf <biological_function> .
    
    <binds>     a rdf:Property;
         :inverseOf <bound_to> .
    
    <biological_function>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <part_of>;
             :hasValue <process> ],
                <function> .
    
    <biological_system>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <comprised_of>;
             :hasValue <process> ],
                 [
             a :Restriction;
             :hasValue <biopathway>;
             :onProperty <has_part> ] .
    
    <biopathway>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <biological_function>;
             :onProperty <has_function> ],
                 [
             a :Restriction;
             :onProperty <part_of>;
             :hasValue <process> ],
                 [
             a :Restriction;
             :minCardinality "1";
             :onProperty <part_of>;
             :hasValue <process> ],
                 [
             a :Restriction;
             :hasValue <biopathway>;
             :onProperty <has_child> ],
                 [
             a :Restriction;
             :onProperty <has_part>;
             :hasValue <reaction> ],
                 [
             a :Restriction;
             :toClass  [
                 a b:Class ];
             :onProperty <unique_id> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :unionOf  (
                
                
                
                
                <process> <chemical> <gene> <biopathway>  ) ];
             :onProperty <upstream> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :unionOf  (
                
                
                
                
                <process> <chemical> <gene> <biopathway>  ) ];
             :onProperty <downstream> ],
                <transformation> .
    
    <bound_to>     a rdf:Property .
    
    <boundary>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <around>;
             :hasValue <compartment> ],
                <physical_structure> .
    
    <boundary_transport>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :intersectionOf  (
                
                 [
                         a :Restriction;
                         :hasValue  [
                             a b:Class;
                             :oneOf  (
                            
                            <compartment_A>  ) ];
                         :onProperty <located_in> ]
                <chemical>  ) ];
             :onProperty <upstream> ],
                 [
             a :Restriction;
             :onProperty <across>;
             :hasValue <boundary> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :intersectionOf  (
                
                 [
                         a :Restriction;
                         :hasValue  [
                             a b:Class;
                             :oneOf  (
                            
                            <compartment_B>  ) ];
                         :onProperty <located_in> ]
                <chemical>  ) ];
             :onProperty <downstream> ],
                <reaction> .
    
    <carbohydrate>     a b:Class;
         b:subClassOf <small_molecule> .
    
    <catalysed_by>     a rdf:Property .
    
    <catalyses>     a rdf:Property;
         :inverseOf <catalysed_by>;
         b:domain <macromolecule>;
         b:range <reaction> .
    
    <cell>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <cell_state>;
             :onProperty <has_state> ],
                 [
             a :Restriction;
             :onProperty <part_of>;
             :hasValue <tissue> ],
                <physical_structure> .
    
    <cell_adhesion>     a b:Class;
         b:subClassOf <biological_function> .
    
    <cell_cycle_regulator>     a b:Class;
         b:subClassOf <regulation> .
    
    <cell_state>     a b:Class;
         b:subClassOf <modifier> .
    
    <chaperone>     a b:Class;
         b:subClassOf <biological_function> .
    
    <chemical>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <compartment>;
             :onProperty <located_in> ] .
    
    <chromosome>     a b:Class;
         b:subClassOf <dna_structure> .
    
    <classification>     a b:Class;
         b:subClassOf <mental_structure> .
    
    <coenzyme>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :onProperty <loosely_bound_to>;
                 :hasValue <protein> ]
        <cofactor>  ) .
    
    <coenzyme_requiring_enzyme>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <amino_acid>;
             :onProperty <polymer_of> ],
                 [
             a :Restriction;
             :toClass <amino_acid>;
             :onProperty <polymer_of> ],
                 [
             a :Restriction;
             :onProperty <catalyses>;
             :hasValue <reaction> ],
                 [
             a :Restriction;
             :onProperty <binds>;
             :hasValue <coenzyme> ],
                <enzyme> .
    
    <cofactor>     a b:Class;
         :intersectionOf  (
         [
                 a b:Class;
                 :unionOf  (
                
                
                <small_molecule> <metal_ion>  ) ]
         ) .
    
    <compartment>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <part_of>;
             :hasValue <physical_structure> ],
                <physical_structure> .
    
    <compartment_A>     a :Thing .
    
    <compartment_B>     a :Thing .
    
    <complement_dna>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :hasValue  [
                     a b:Class;
                     :oneOf  (
                    
                    <single>  ) ];
                 :onProperty <has_strandedness> ]
         [
                 a :Restriction;
                 :hasValue <messenger_rna>;
                 :onProperty <transcribed_from> ]
        <dna>  ) .
    
    <complex>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :minCardinality "2";
             :onProperty <has_part>;
             :hasValue <protein> ],
                <macromolecule> .
    
    <comprised_of>     a rdf:Property .
    
    <condition>     a b:Class .
    
    <conflict>     a <c:feature_type> .
    
    <coordinate>     a b:Class;
         b:subClassOf <mental_structure> .
    
    <covalent_reaction>     a b:Class;
         b:subClassOf <reaction> .
    
    <cytoskeletal_regulator>     a b:Class;
         b:subClassOf <regulation> .
    
    <defenseimmunity_protein>     a b:Class;
         b:subClassOf <biological_function> .
    
    <delta_H>     a rdf:Property .
    
    <delta_S>     a rdf:Property .
    
    <deoxynucleotide>     a b:Class;
         b:subClassOf <nucleotide> .
    
    <developmental_stage>     a b:Class;
         b:subClassOf <condition> .
    
    <disease>     a b:Class;
         b:subClassOf <condition> .
    
    <disease_state>     a b:Class;
         b:subClassOf <modifier> .
    
    <dna>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :onProperty <has_strandedness>;
                 :hasValue :Thing ]
        <nucleic_acid>  ) .
    
    <dna_structure>     a b:Class;
         b:subClassOf <physical_structure> .
    
    <double>     a <c:selector> .
    
    <double_stranded_dna>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :hasValue  [
                     a b:Class;
                     :oneOf  (
                    
                    <double>  ) ];
                 :onProperty <has_strandedness> ]
        <dna>  ) .
    
    <downstream>     a rdf:Property .
    
    <ec_number>     a b:Class;
         b:subClassOf <label> .
    
    <enclosed_by>     a rdf:Property;
         :inverseOf <around> .
    
    <enhancer>     a <c:feature_type> .
    
    <environment>     a b:Class;
         b:subClassOf <condition> .
    
    <enzyme>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :onProperty <catalyses>;
                 :hasValue <reaction> ]
        <protein>  );
         b:subClassOf  [
             a b:Class;
             :unionOf  (
             [
                     a :Restriction;
                     :hasValue <ec_number>;
                     :onProperty <has_ec_number> ]
             ) ] .
    
    <enzyme_activator>     a b:Class;
         b:subClassOf <regulation> .
    
    <enzyme_function>     a b:Class;
         b:subClassOf <biological_function> .
    
    <enzyme_inhibitor>     a b:Class;
         b:subClassOf <regulation> .
    
    <exon>     a b:Class;
         b:subClassOf <dna_structure> .
    
    <expressed_sequence_tag>     a b:Class;
         :equivalentTo <complement_dna>;
         b:subClassOf  [
             a :Restriction;
             :hasValue <tissue>;
             :onProperty <transcribed_from> ],
                 [
             a :Restriction;
             :onProperty <affected_by>;
             :hasValue <condition> ],
                 [
             a :Restriction;
             :hasValue <methodology>;
             :onProperty <produced_by> ],
                <complement_dna> .
    
    <expression_profile>     a b:Class .
    
    <fad>     a b:Class;
         b:subClassOf <prosthetic_group> .
    
    <feature_type>     a b:Class;
         b:subClassOf <format_component> .
    
    <field>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :toClass  [
                 a b:Class ];
             :onProperty <has_content> ],
                 [
             a :Restriction;
             :toClass  [
                 a b:Class ];
             :onProperty <in_column> ],
                <format_component> .
    
    <five_UTR>     a <c:feature_type> .
    
    <five_clip>     a <c:feature_type> .
    
    <format_component>     a b:Class .
    
    <forms_complex>     a rdf:Property .
    
    <forms_polymer>     a rdf:Property .
    
    <function>     a b:Class .
    
    <genbank_file>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :toClass  [
                 a b:Class ];
             :onProperty <inc:has_name> ],
                 [
             a :Restriction;
             :onProperty <has_content>;
             :toClass <record> ],
                <format_component> .
    
    <genbank_release>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :toClass  [
                 a b:Class ];
             :onProperty <inc:has_name> ],
                 [
             a :Restriction;
             :toClass <genbank_file>;
             :onProperty <has_content> ],
                <format_component> .
    
    <gene>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <gene_structure>;
             :onProperty <has_structure> ],
                 [
             a :Restriction;
             :hasValue <function>;
             :onProperty <has_function> ],
                 [
             a :Restriction;
             :hasValue <rna>;
             :onProperty <transcribed_to> ],
                 [
             a :Restriction;
             :onProperty <located_at>;
             :hasValue <map_location> ],
                 [
             a :Restriction;
             :onProperty <comprised_of>;
             :hasValue <dna> ] .
    
    <gene_network>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <gene_network>;
             :onProperty <has_child> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :intersectionOf  (
                
                 [
                         a :Restriction;
                         :hasValue <gene>;
                         :onProperty <upstream> ]
                 [
                         a :Restriction;
                         :onProperty <downstream>;
                         :hasValue <gene> ]
                <reaction>  ) ];
             :onProperty <has_part> ],
                <biopathway> .
    
    <gene_regulation>     a b:Class;
         b:subClassOf <function> .
    
    <gene_structure>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :intersectionOf  (
                
                 [
                         a :Restriction;
                         :hasValue  [
                             a b:Class;
                             :intersectionOf  (
                            
                             [
                                     a :Restriction;
                                     :hasValue  [
                                         a b:Class;
                                         :unionOf  (
                                        
                                        
                                        <intron> <exon>  ) ];
                                     :onProperty <has_content> ]
                            <pair>  ) ];
                         :onProperty <has_content> ]
                <ordered_set>  ) ];
             :onProperty <has_part> ],
                 [
             a :Restriction;
             :toClass  [
                 a b:Class;
                 :unionOf  (
                
                
                <intron> <exon>  ) ];
             :onProperty <has_part> ],
                <physical_structure> .
    
    <genomic_dna>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :hasValue  [
                     a b:Class;
                     :oneOf  (
                    
                    <double>  ) ];
                 :onProperty <has_strandedness> ]
         [
                 a :Restriction;
                 :hasValue  [
                     a b:Class;
                     :unionOf  (
                    
                    
                    <plasmid> <chromosome>  ) ];
                 :onProperty <part_of> ]
        <dna>  ) .
    
    <has_accession_number>     a rdf:Property;
         b:domain  [
             a b:Class;
             :unionOf  (
            
            
            <nucleic_acid> <protein>  ) ];
         b:range <accession_number> .
    
    <has_child>     a rdf:Property .
    
    <has_content>     a rdf:Property .
    
    <has_ec_number>     a rdf:Property;
         b:domain <enzyme>;
         b:range <ec_number> .
    
    <has_function>     a rdf:Property .
    
    <has_name>     a rdf:Property;
         :inverseOf <name_of>;
         b:range <name> .
    
    <has_part>     a rdf:Property;
         :inverseOf <part_of> .
    
    <has_role>     a rdf:Property .
    
    <has_species>     a rdf:Property;
         b:range <species> .
    
    <has_state>     a rdf:Property .
    
    <has_strandedness>     a rdf:Property;
         b:domain <nucleic_acid>;
         b:range  [
             a b:Class;
             :oneOf  (
            
            
            <single> <double>  ) ] .
    
    <has_structure>     a rdf:Property .
    
    <holoenzyme>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :onProperty <catalyses>;
                 :hasValue <reaction> ]
         [
                 a :Restriction;
                 :onProperty <binds>;
                 :hasValue <prosthetic_group> ]
        <protein>  ) .
    
    <holoprotein>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :onProperty <binds>;
                 :hasValue <prosthetic_group> ]
        <protein>  ) .
    
    <hydrolase>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :onProperty <catalyses>;
                 :hasValue <hydrolysis> ]
        <enzyme>  ) .
    
    <hydrolysis>     a b:Class;
         b:subClassOf <covalent_reaction> .
    
    <hyphen>     a <c:feature_type> .
    
    <iDNA>     a <c:feature_type> .
    
    <in_column>     a rdf:Property .
    
    <interaction>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <complex>;
             :onProperty <forms_complex> ],
                 [
             a :Restriction;
             :onProperty <binds>;
             :hasValue <macromolecule> ],
                 [
             a :Restriction;
             :minCardinality "2";
             :onProperty <binds>;
             :hasValue <macromolecule> ],
                 [
             a :Restriction;
             :cardinality "1";
             :hasValue <complex>;
             :onProperty <forms_complex> ],
                <reaction> .
    
    <intron>     a b:Class;
         b:subClassOf <dna_structure> .
    
    <ion>     a b:Class;
         b:subClassOf <chemical> .
    
    <is_part_of>     a rdf:Property .
    
    <label>     a b:Class;
         b:subClassOf <mental_structure> .
    
    <ligand_binding_or_carrier>     a b:Class;
         b:subClassOf <binding> .
    
    <ligand_function>     a b:Class;
         b:subClassOf <signal_transduction> .
    
    <ligation>     a b:Class;
         b:subClassOf <covalent_reaction> .
    
    <located_at>     a rdf:Property .
    
    <located_in>     a rdf:Property;
         b:subPropertyOf <located_at> .
    
    <loosely_binds>     a rdf:Property;
         :inverseOf <loosely_bound_to>;
         b:subPropertyOf <binds> .
    
    <loosely_bound_to>     a rdf:Property .
    
    <mRNA>     a <c:feature_type> .
    
    <macromolecule>     a b:Class;
         b:subClassOf <chemical> .
    
    <map_location>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <dna_structure>;
             :onProperty <located_at> ],
                <physical_structure> .
    
    <mat_peptide>     a <c:feature_type> .
    
    <mental_structure>     a b:Class .
    
    <messenger_rna>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :onProperty <polymer_of>;
                 :hasValue <ribonucleotide> ]
         [
                 a :Restriction;
                 :onProperty <polymer_of>;
                 :toClass <ribonucleotide> ]
         [
                 a :Restriction;
                 :hasValue <dna>;
                 :onProperty <transcribed_from> ]
         [
                 a :Restriction;
                 :toClass <dna>;
                 :onProperty <transcribed_from> ]
         [
                 a :Restriction;
                 :hasValue <protein>;
                 :onProperty <translated_to> ]
         [
                 a :Restriction;
                 :toClass <protein>;
                 :onProperty <translated_to> ]
        <rna>  ) .
    
    <metabolic_pathway>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <has_child>;
             :hasValue <metabolic_pathway> ],
                <biopathway> .
    
    <metal>     a b:Class;
         b:subClassOf <atom> .
    
    <metal_ion>     a b:Class;
         :intersectionOf  (
        
        
        <ion> <metal>  ) .
    
    <methodology>     a b:Class;
         b:subClassOf <mental_structure> .
    
    <microtubule_binding>     a b:Class;
         b:subClassOf <binding> .
    
    <misc_RNA>     a <c:feature_type> .
    
    <misc_binding>     a <c:feature_type> .
    
    <misc_difference>     a <c:feature_type> .
    
    <misc_feature>     a <c:feature_type> .
    
    <misc_recomb>     a <c:feature_type> .
    
    <misc_signal>     a <c:feature_type> .
    
    <misc_structure>     a <c:feature_type> .
    
    <modified_base>     a <c:feature_type> .
    
    <modifier>     a b:Class .
    
    <molecular_function_unknown>     a b:Class;
         b:subClassOf <biological_function> .
    
    <motor>     a b:Class;
         b:subClassOf <biological_function> .
    
    <mutation>     a <c:feature_type> .
    
    <nad>     a b:Class;
         b:subClassOf <prosthetic_group> .
    
    <nad_requiring_oxidoreductase>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <amino_acid>;
             :onProperty <polymer_of> ],
                 [
             a :Restriction;
             :toClass <amino_acid>;
             :onProperty <polymer_of> ],
                 [
             a :Restriction;
             :onProperty <catalyses>;
             :hasValue <oxidation_reduction> ],
                 [
             a :Restriction;
             :onProperty <binds>;
             :hasValue <nad> ],
                <enzyme> .
    
    <name>     a b:Class;
         b:subClassOf <label> .
    
    <name_of>     a rdf:Property .
    
    <non_metal>     a b:Class;
         b:subClassOf <atom> .
    
    <nucleic_acid>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <nucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <nucleotide>;
                 :onProperty <polymer_of> ]
        <macromolecule>  ) .
    
    <nucleic_acid_binding>     a b:Class;
         b:subClassOf <binding> .
    
    <nucleotide>     a b:Class;
         b:subClassOf <small_molecule> .
    
    <obsolete>     a b:Class;
         b:subClassOf <biological_function> .
    
    <old_sequence>     a <c:feature_type> .
    
    <ordered_set>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <has_content>;
             :hasValue <pair> ],
                 [
             a :Restriction;
             :minCardinality "1";
             :onProperty <has_content>;
             :hasValue <pair> ],
                <mental_structure> .
    
    <organ>     a b:Class;
         b:subClassOf <anatomy> .
    
    <organism_classification>     a b:Class;
         b:subClassOf <classification> .
    
    <oxidation_reduction>     a b:Class;
         b:subClassOf <covalent_reaction> .
    
    <oxidoreductase>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :onProperty <catalyses>;
                 :hasValue <oxidation_reduction> ]
        <enzyme>  ) .
    
    <pair>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <has_name>;
             :hasValue :Thing ],
                 [
             a :Restriction;
             :onProperty <has_content>;
             :hasValue :Thing ],
                <mental_structure> .
    
    <param_type>     a rdf:Property .
    
    <param_unit>     a rdf:Property .
    
    <param_value>     a rdf:Property .
    
    <parameter>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue  [
                 a b:Class ];
             :onProperty <param_type> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class ];
             :onProperty <param_value> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class ];
             :onProperty <param_unit> ] .
    
    <part_of>     a rdf:Property .
    
    <physical_structure>     a b:Class .
    
    <plasmid>     a b:Class;
         b:subClassOf <dna_structure> .
    
    <polyA_signal>     a <c:feature_type> .
    
    <polyA_site>     a <c:feature_type> .
    
    <polymer_of>     a rdf:Property;
         :inverseOf <forms_polymer>;
         b:range <small_molecule> .
    
    <precursor_RNA>     a <c:feature_type> .
    
    <prim_transcript>     a <c:feature_type> .
    
    <primer>     a <c:feature_type> .
    
    <primer_bind>     a <c:feature_type> .
    
    <process>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <has_child>;
             :hasValue <process> ],
                 [
             a :Restriction;
             :onProperty <has_role>;
             :hasValue <role> ],
                 [
             a :Restriction;
             :hasValue <biological_function>;
             :onProperty <has_part> ],
                <transformation> .
    
    <produced_by>     a rdf:Property .
    
    <prosthetic_group>     a b:Class;
         :intersectionOf  (
        
         [
                 a b:Class;
                 :complementOf <metal_ion> ]
         [
                 a :Restriction;
                 :hasValue <protein>;
                 :onProperty <strongly_bound_to> ]
        <cofactor>  ) .
    
    <protein>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <amino_acid>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :hasValue <messenger_rna>;
                 :onProperty <translated_from> ]
        <macromolecule>  );
         b:subClassOf  [
             a b:Class;
             :unionOf  (
             [
                     a :Restriction;
                     :cardinality "1";
                     :hasValue <accession_number>;
                     :onProperty <has_accession_number> ]
             ) ],
                 [
             a b:Class;
             :unionOf  (
             [
                     a :Restriction;
                     :minCardinality "1";
                     :onProperty <has_species>;
                     :hasValue <species> ]
             ) ] .
    
    <protein_tagging>     a b:Class;
         b:subClassOf <biological_function> .
    
    <rRNA>     a <c:feature_type> .
    
    <reaction>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :minCardinality "1";
             :hasValue <chemical>;
             :onProperty <upstream> ],
                 [
             a :Restriction;
             :minCardinality "1";
             :hasValue <chemical>;
             :onProperty <downstream> ],
                 [
             a :Restriction;
             :hasValue <chemical>;
             :onProperty <downstream> ],
                 [
             a :Restriction;
             :onProperty <has_part>;
             :hasValue <reaction> ],
                 [
             a :Restriction;
             :minCardinality "0";
             :onProperty <has_part>;
             :hasValue <reaction> ],
                 [
             a :Restriction;
             :hasValue <chemical>;
             :onProperty <upstream> ],
                 [
             a :Restriction;
             :onProperty <delta_H>;
             :hasValue <parameter> ],
                 [
             a :Restriction;
             :onProperty <delta_S>;
             :hasValue <parameter> ],
                <transformation> .
    
    <receptor>     a b:Class;
         b:subClassOf <signal_transduction> .
    
    <receptor_signalling_protein>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <has_function>;
             :hasValue <signal_transduction> ],
                <protein> .
    
    <record>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <field>;
             :onProperty <has_content> ],
                 [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :oneOf  (
                <ACCESSION> 
                <DEFINITION> 
                <FEATURES> 
                <KEYWORDS> 
                <LOCUS> 
                <ORIGIN> 
                <REFERENCE> 
                <SEGMENT> 
                <SEQUENCE> 
                <SOURCE> 
                <VERSION> 
                 ) ];
             :onProperty <inc:has_name> ],
                <format_component> .
    
    <regulation>     a b:Class;
         b:subClassOf <biological_function> .
    
    <rep_origin>     a <c:feature_type> .
    
    <repeat_region>     a <c:feature_type> .
    
    <repeat_unit>     a <c:feature_type> .
    
    <ribonucleotide>     a b:Class;
         b:subClassOf <nucleotide> .
    
    <ribosomal_rna>     a b:Class;
         b:subClassOf <rna> .
    
    <ribosomal_rna_function>     a b:Class;
         b:subClassOf <biological_function> .
    
    <ribozyme>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :onProperty <polymer_of>;
                 :hasValue <ribonucleotide> ]
         [
                 a :Restriction;
                 :onProperty <polymer_of>;
                 :toClass <ribonucleotide> ]
         [
                 a :Restriction;
                 :onProperty <catalyses>;
                 :hasValue <covalent_reaction> ]
        <rna>  ) .
    
    <rna>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :onProperty <polymer_of>;
                 :hasValue <ribonucleotide> ]
         [
                 a :Restriction;
                 :onProperty <polymer_of>;
                 :toClass <ribonucleotide> ]
        <nucleic_acid>  ) .
    
    <role>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <is_part_of>;
             :hasValue <process> ],
                <mental_structure> .
    
    <satellite>     a <c:feature_type> .
    
    <scRNA>     a <c:feature_type> .
    
    <selector>     a b:Class;
         b:subClassOf <modifier> .
    
    <sequence_entry>     a b:Class;
         b:subClassOf <format_component> .
    
    <sig_peptide>     a <c:feature_type> .
    
    <signal_transduction>     a b:Class;
         b:subClassOf <biological_function> .
    
    <signal_transduction_pathway>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :onProperty <has_function>;
             :hasValue <signal_transduction> ],
                 [
             a :Restriction;
             :onProperty <has_child>;
             :hasValue <signal_transduction_pathway> ],
                <biopathway> .
    
    <single>     a <c:selector> .
    
    <single_stranded_dna>     a b:Class;
         :intersectionOf  (
        
         [
                 a :Restriction;
                 :hasValue <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :toClass <deoxynucleotide>;
                 :onProperty <polymer_of> ]
         [
                 a :Restriction;
                 :hasValue  [
                     a b:Class;
                     :oneOf  (
                    
                    <single>  ) ];
                 :onProperty <has_strandedness> ]
        <dna>  ) .
    
    <small_molecule>     a b:Class;
         b:subClassOf <chemical> .
    
    <small_nuclear_rna_function>     a b:Class;
         b:subClassOf <biological_function> .
    
    <small_nucleolar_rna_function>     a b:Class;
         b:subClassOf <biological_function> .
    
    <snRNA>     a <c:feature_type> .
    
    <source2>     a <c:feature_type> .
    
    <species>     a b:Class;
         :equivalentTo  [
             a b:Class;
             :intersectionOf  (
            
             [
                     a :Restriction;
                     :hasValue  [
                         a b:Class;
                         :oneOf  (
                        <ORGANISM> 
                         ) ];
                     :onProperty <has_content> ]
            <record>  ) ];
         b:subClassOf <organism_classification> .
    
    <stem_loop>     a <c:feature_type> .
    
    <storage_protein>     a b:Class;
         b:subClassOf <biological_function> .
    
    <strongly_binds>     a rdf:Property;
         :inverseOf <strongly_bound_to>;
         b:subPropertyOf <binds> .
    
    <strongly_bound_to>     a rdf:Property .
    
    <structural_protein>     a b:Class;
         b:subClassOf <biological_function> .
    
    <sub_feature_type>     a b:Class;
         b:subClassOf <format_component> .
    
    <sub_record>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue  [
                 a b:Class;
                 :oneOf  (
                <AUTHORS> 
                <JOURNAL> 
                <ORGANISM> 
                <TITLE> 
                 ) ];
             :onProperty <inc:has_name> ],
                 [
             a :Restriction;
             :onProperty <is_part_of>;
             :toClass <record> ],
                 [
             a :Restriction;
             :cardinality "1";
             :onProperty <is_part_of>;
             :hasValue <record> ],
                <record> .
    
    <tRNA>     a <c:feature_type> .
    
    <terminator>     a <c:feature_type> .
    
    <three_UTR>     a <c:feature_type> .
    
    <three_clip>     a <c:feature_type> .
    
    <tissue>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <organ>;
             :onProperty <part_of> ],
                 [
             a :Restriction;
             :hasValue <age>;
             :onProperty <has_state> ],
                 [
             a :Restriction;
             :hasValue <developmental_stage>;
             :onProperty <has_state> ],
                 [
             a :Restriction;
             :hasValue <biological_system>;
             :onProperty <part_of> ],
                <physical_structure> .
    
    <transcribed_from>     a rdf:Property;
         :inverseOf <transcribed_to> .
    
    <transcribed_to>     a rdf:Property .
    
    <transcription_factor_binding>     a b:Class;
         b:subClassOf <binding> .
    
    <transfer_rna>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue <dna>;
             :onProperty <transcribed_from> ],
                <rna> .
    
    <transfer_rna_function>     a b:Class;
         b:subClassOf <biological_function> .
    
    <transformation>     a b:Class;
         b:subClassOf  [
             a :Restriction;
             :hasValue :Thing;
             :onProperty <upstream> ],
                 [
             a :Restriction;
             :onProperty <downstream>;
             :hasValue :Thing ] .
    
    <transit_peptide>     a <c:feature_type> .
    
    <translated_from>     a rdf:Property;
         :inverseOf <translated_to> .
    
    <translated_to>     a rdf:Property .
    
    <transporter>     a b:Class;
         b:subClassOf <biological_function> .
    
    <transposon>     a <c:feature_type> .
    
    <tumor_suppressor>     a b:Class;
         b:subClassOf <regulation> .
    
    <two_component_response_regulator>     a b:Class;
         b:subClassOf <signal_transduction> .
    
    <two_component_sensor_molecule>     a b:Class;
         b:subClassOf <signal_transduction> .
    
    <unique_id>     a rdf:Property .
    
    <unsure>     a <c:feature_type> .
    
    <upstream>     a rdf:Property .
    
    <variation>     a <c:feature_type> .
    
    <inc:exon>     a <c:feature_type> .
    
    <inc:gene>     a <c:feature_type> .
    
    <inc:has_name>     a rdf:Property .
    
    <inc:intron>     a <c:feature_type> .
    
 #ENDS